PLANT BIOLOGY
ANIMAL BIOLOGY
SUBSCRIPTION
E-SUBSCRIPTION
 
MAP
MAIN PAGE

 

 

 

 

doi: 10.15389/agrobiology.2024.6.1237eng

UDC: 619:579.62:577.21

 

DEVELOPMENT OF REAL-TIME PCR TEST SYSTEMS FOR DETECTION OF Mycoplasma bovis AND M. bovigenitalium DNA

M. Abed Alhussen, A.O. Krotova, O.E. Fedorova, V.M. Zakharov,
T.V. Zhbanova, O.P. Byadovskaya, A.V. Sprygin

Federal Center for Animal Health Control, mkr. Yurievets, Vladimir, 600901 Russia, e-mail abed@arriah.ru, krotova@arriah.ru, fedorova@arriah.ru,
zaharov@arriah.ru, zhbanova@arriah.ru, bjadovskaya@arriah.ru,
sprygin@arriah.ru (✉ corresponding author)

ORCID:
Abed Alhussen M. orcid.org/0000-0002-1210-0303
Zhbanova T.V. orcid.org/0000-0002-9857-5915
Krotova A.O. orcid.org/0000-0002-8311-4681
Byadovskaya O.P. orcid.org/0000-0002-8326-7151
Fedorova O.E. orcid.org/0009-0006-0498-2904
Sprygin A.V. orcid.org/0000-0001-5982-3675
Zakharov V.M. orcid.org/0009-0003-3587-2853

Final revision received January 24, 2024
Accepted April 03, 2024

Currently, the causative agents of cattle mycoplasmosis caused by Mycoplasma bovis and M. bovigenitalium are prevalent in livestock farms all over the world, including the Russian Federation. Clinical signs observed in cattle mycoplasmosis are upper respiratory tract infection, serous catarrhal inflammation of the lungs, arthritis, rhinitis, pneumonia in young cattle, abortions in pregnant animals, vulvovaginitis, mastitis and birth of dead or non-viable litter. The economic damage includes mortality, involuntary slaughter, loss of live weight and offspring, treatment costs, prevention, etc. In this regard, the development of methods for detection of these pathogens is of high significance for the control of mycoplasma infection. This study is aimed at the development and optimization of methods for detection of M. bovis and M. bovigenitalium genomes using real-time polymerase chain reaction. For this purpose, we analyzed the genetic sequences of the GenBank database and selected the fusA locus for M. bovis and the 16S-23S rRNA locus for M. bovigenitalium. The optimum concentrations of the reaction components: magnesium chloride 5.5 mM for M. bovis and 6.0 mM for M. bovigenitalium, deoxynucleoside triphosphates 300 mM for M. bovis and 200 mM for M. bovigenitalium, primers 0.4 mM for M. bovis and 0.3 mM for M. bovigenitalium, fluorescent probes 0.05 mM for M. bovis and 0.15 mM for M. bovigenitalium; the temperature and time conditions for M. bovis and M. bovigenitalium were as follows: 10 min at 95 °С (reaction mixture heating), then 40 PCR cycles consisting of DNA denaturation for 10 s at 95 °С, primer annealing and cDNA elongation for 60 s at 60 °С. A high analytical specificity, detection limit of mycoplasma DNA, which was 25-50 CFU/ml, and amplification efficiency of 90.94 and 91.85% for M. bovis and M. bovigenitalium, respectively, were established. Therefore, as a result of these studies, specific and reproducible test systems based on real-time polymerase chain reaction for detection of M. bovis and M. bovigenitalium DNA for routine diagnosis of bovine mycoplasmosis have been developed.

Keywords: Mycoplasma bovis, Mycoplasma bovigenitalium, real-time polymerase chain reaction, qPCR, sensitivity, specificity, amplification efficiency.

 

REFERENCES

  1. Rezanejad M., Karimi S., Momtaz H. Phenotypic and molecular characterization of antimicrobial resistance in Trueperella pyogenes strains isolated from bovine mastitis and metritis. BMC Microbiology, 2019, 19(1): 305 CrossRef
  2. Triadi B., Suwarno S., Sarudji S., Damayanti R., Sugihartuti R., Soelih Estoepangesti. A.T. Antibiotic sensitivity test of Escherichia coli and Staphylococcus aureus isolated from the reproductive tract of dairy cows. Ovozoa: Journal of Animal Reproduction, 2022, 11(2): 72-80 CrossRef
  3. Ying Y.-T., Yang J., Tan X., Liu R., Zhuang Y., Xu J.-X., Ren W.-J. Escherichia coli and Staphylococcus aureus differentially regulate Nrf2 pathway in bovine mammary epithelial cells: relation to distinct innate immune response. Cells, 2021, 10(12): 3426 CrossRef
  4. Patel K., Godden S.M., Royster E.E., Crooker B.A., Johnson T.J., Smith E.A., Sreevatsan S. Prevalence, antibiotic resistance, virulence and genetic diversity of Staphylococcus aureus isolated from bulk tank milk samples of U.S. dairy herds. BMC Genomics, 2021, 22(1): 367 CrossRef
  5. Mihailovskaya V.S., Remezovskaya N.B., Zhdanova I.N., Starcic Erjavec M., Kuznetsova M.V. Virulence potential of faecal Escherichia coli strains isolated from healthy cows and calves on farms in Perm Krai. Vavilovskii Zhurnal Genet. Selektsii, 2022, 26(5): 486-494 CrossRef
  6. Viñes J., Cuscó A., Napp S., Alvarez J., Saez-Llorente J.L., Rosàs-Rodoreda M., Francino O., Migura-Garcia L. Transmission of similar Mcr-1 carrying plasmids among different Escherichia coli lineages isolated from livestock and the farmer. Antibiotics, 2021, 10(3): 313 CrossRef
  7. Richardson E.J., Bacigalupe R., Harrison E.M., Weinert L.A., Lycett S., Vrieling M., Robb K., Hoskisson P.A., Holden M.T.G., Feil E.J., Paterson G.K., Tong S.Y.C., Shittu A., van Wamel W., Aanensen D.M., Parkhill J., Peacock S.J., Corander J., Holmes M., Fitzgerald J.R. Gene exchange drives the ecological success of a multi-host bacterial pathogen. Nature Ecology & Evolution, 2018, 2(9): 1468-1478 CrossRef
  8. Wielders C.L., Fluit A.C., Brisse S., Verhoef J., Schmitz F.J. mecA gene is widely disseminated in Staphylococcus aureus population. Journal of Clinical Microbiology, 2002, 40(11): 3970-3975 CrossRef
  9. Chai M., Sukiman M.Z., Kamarun Baharin A.H., Ramlan I., Lai L.Z., Liew Y., Malayandy P., Mohamad N.M., Choong S., Ariffin S.M.Z., Ghazali M.F. Methicillin-resistant Staphylococcus aureus from Peninsular Malaysian animal handlers: molecular profile, antimicrobial resistance, immune evasion cluster and genotypic categorization. Antibiotics, 2022, 11(1): 103 CrossRef
  10. Klotz M., Opper S., Heeg K., Zimmermann S. Detection of Staphylococcus aureus enterotoxins A to D by real-time fluorescence PCR assay. Journal of Clinical Microbiology, 2003, 41(10): 4683-4687 CrossRef
  11. Gholamzad M., Khatami M.R., Ghassemi S., Vaise Malekshahi Z., Shooshtari M.B. Detection of Staphylococcus enterotoxin B (SEB) using an immunochromatographic test strip. Jundishapur Journal of Microbiology, 2015, 8(9): e26793 CrossRef
  12. Saadati M., Barati B., Doroudian M., Shirzad H., Hashemi M., Hosseini S.M., Salehi Chaleshtari A.R., Bahmani M.-K., Hosseinzadeh S., Imani S. Detection of Sea, Seb, Sec, Seq genes in Staphylococcus aureus isolated from nasal carriers in Tehran province, Iran; by multiplex PCR. Archives of Advances in Biosciences, 1970, 2(2): 34-40 CrossRef
  13. Lee Y.-D., Moon B.Y., Park J.H., Chang H.I., Kim W.J. Expression of enterotoxin genes in Staphylococcus aureus isolates based on mRNA analysis. Journal of Microbiology and Biotechnology, 2007, 17(3): 461-467.
  14. Bzdil J., Zouharova M., Nedbalcova K., Sladecek V., Senk D., Holy O. Oxacillin (methicillin) resistant Staphylococci in domestic animals in the Czech Republic. Pathogens, 2021, 10(12): 1585 CrossRef
  15. He C., Xu S., Zhao H., Hu F., Xu X., Jin S., Yang H., Gong F., Liu Q. Leukotoxin and pyrogenic toxin Superantigen gene backgrounds in bloodstream and wound Staphylococcus aureus isolates from eastern region of China. BMC Infectious Diseases, 2018, 18(1): 395 CrossRef
  16. Drożdż K., Ochońska D., Ścibik L., Gołda-Cępa M., Biegun K., Brzychczy-Włoch M. The frequency of occurrence of resistance and genes involved in the process of adhesion and accumulation of biofilm in Staphylococcus aureus strains isolated from tracheostomy tubes. Microorganisms, 2022, 10(6): 1210 CrossRef
  17. Wood C., Sahl J., Maltinsky S., Coyne B., Russakoff B., Yague D.P., Bowers J., Pearson T. SaQuant: a real-time PCR assay for quantitative assessment of Staphylococcus aureus. BMC Microbiol, 2021, 21(1): 174 CrossRef
  18. Shahmoradi M., Faridifar P., Shapouri R., Mousavi S.F., Ezzedin M., Mirzaei B. Determining the biofilm forming gene profile of Staphylococcus aureus clinical isolates via multiplex colony PCR method. Reports of Biochemistry & Molecular Biology, 2019, 7(2): 181-188.
  19. Eslami M., Nourizadeh A., Salek Farrokhi A., Fallahi S. Detection of Amp-C type producing Escherichia coli using the clavulanic acid and boronic acid inhibitor and multiplex PCR method. Life Science Journal, 2013, 10(12s): 278-283.
  20. Narasanna R., Surwonse S., Chavadi M., Kelmani C. PCR detection of blaIMP gene in metallo-β-lactamase resistant E. coli isolated from clinical samples. International Journal of Current Microbiology and Applied Sciences, 2019, 8(2): 2696-2701 CrossRef
  21. Vittecoq M., Laurens C., Brazier L., Durand P., Elguero E., Arnal A., Thomas F., Aberkane S., Renaud N., Prugnolle F., Solassol J., Jean-Pierre H., Godreuil S., Renaud F. VIM-1 carbapenemase-producing Escherichia coli in gulls from southern France. Ecology and Evolution, 2017, 7(4): 1224-1232 CrossRef
  22. Cengiz M., Uslu M.O., Balcioglu I. Treatment of E. coli HB101 and the tetM gene by Fenton's reagent and ozone in cow manure. Journal of Environmental Management, 2010, 91(12): 2590-2593 CrossRef
  23. Gadou V., Guessennd N., Toty A., Fernique K., Ouattara M., Dosso M., Seydina D., Djaman J., Rolain J.-M. Molecular detection of the arr-2 gene in Escherichia coli and Klebsiella pneumoniae resistant to rifampicin in Abidjan, Côte D'Ivoire. Microbiology Research Journal International, 2018, 23(4): 1-8 CrossRef
  24. Sobhy N.M., Yousef S.G.A., Aboubakr H.A., Nisar M., Nagaraja K.V., Mor S.K., Valeris-Chacin R.J., Goyal S.M. Virulence factors and antibiograms of Escherichia coli isolated from diarrheic calves of Egyptian cattle and water buffaloes. PloS One, 2020, 15(5): e0232890 CrossRef
  25. Lee S.I., Kang S.G., Kang M.L., Yoo H.S. Development of multiplex polymerase chain reaction assays for detecting enterotoxigenic Escherichia coli and their application to field isolates from piglets with diarrhea. Journal of Veterinary Diagnostic Investigation, 2008, 20(4): 492-496 CrossRef
  26. Shams Z., Tahamtan Y., Pourbakhsh A., Hosseiny M.H., Kargar M., Hayati M. Detection of enterotoxigenic K99 (F5) and F41 from fecal sample of calves by molecular and serological methods. Comparative Clinical Pathology, 2012, 21(4): 475-478 CrossRef
  27. Andrade G.I., Coura F.M., Santos E.L., Ferreira M.G., Galinari G.C., Facury Filho E.J., de Carvalho A.U., Lage A.P., Heinemann M.B. Identification of virulence factors by multiplex PCR in Escherichia coli isolated from calves in Minas Gerais, Brazil. Tropical Animal Health and Production, 2012, 44(7): 1783-1790 CrossRef
  28. Bendary M.M., Abd El-Hamid M.I., Alhomrani M., Alamri A.S., Elshimy R., Mosbah R.A., Bahnass M.M., Omar N.N., Al-Sanea M.M., Elmanakhly A.R., Safwat N.A., Alshareef W.A. What is behind the correlation analysis of diarrheagenic E. coli pathotypes? Biology, 2022, 11(7): 1004 CrossRef
  29. Jinneman K.C., Yoshitomi K.J., Weagant S.D. Multiplex real-time PCR method to identify Shiga toxin genes stx1 and stx2 and Escherichia coli O157:H7/H-serotype. Applied and Environmental Microbiology, 2003, 69(10): 6327-6333 CrossRef
  30. Ghanbari F., Ghajavand H., Havaei R., Jami M.S., Khademi F., Heydari L., Shahin M., Havaei S.A. Distribution of erm genes among Staphylococcus aureus isolates with inducible resistance to clindamycin in Isfahan, Iran. Advanced Biomedical Research, 2016, 5: 62 CrossRef
  31. Talebi G., Hashemia A., Goudarzi H., Shariati A., Bostanghadiri N., Sharahi J.Y., Abbsi E. Survey of ermA, ermB, ermC and mecA genes among Staphylococcus aureus isolates isolated from patients admitted to hospitals in Tehran, Iran by PCR and sequencing. Biomedical Research, 2019, 30(2): 1-5 CrossRef
  32. Wong H., Louie L., Watt C., Sy E., Lo R.Y., Mulvey M.R., Simor A.E. Characterization of ermA in macrolide-susceptible strains of methicillin-resistant Staphylococcus aureus. Antimicrobial Agents and Chemotherapy, 2009, 53(8): 3602-3603 CrossRef
  33. Wan T.-W., Hung W.-C., Tsai J.-C., Lin Y.-T., Lee H., Hsueh P.-R., Lee T.-F., Teng L.-J. Novel structure of Enterococcus faecium-originated ermB-positive Tn1546-like element in Staphylococcus aureus. Antimicrobial Agents and Chemotherapy, 2016, 60(10): 6108-6114 CrossRef
  34. Bezborodova N.A., Sokolova O.V., Shkuratova I.A., Lysova Y.Y., Isakova M.N., Kozhukhovskaya V.V. Sensitivity and resistance of the microbiota of reproductive organs and mammary gland of cows to anti-microbial agents in cases of inflammation. International Journal of Biology and Biomedical Engineering, 2020, 14: 49-54 CrossRef
  35. Monistero V., Barberio A., Biscarini F., Cremonesi P., Castiglioni B., Graber H.U., Bottini E., Ceballos-Marquez A., Kroemker V., Petzer I.M., Pollera C., Santisteban C., Veiga Dos Santos M., Bronzo V., Piccinini R., Re G., Cocchi M., Moroni P. Different distribution of antimicrobial resistance genes and virulence profiles of Staphylococcus aureus strains isolated from clinical mastitis in six countries. Journal of Dairy Science, 2020, 103(4): 3431-3446 CrossRef
  36. Aklilu E., Hui Ying C. First mecC and mecA positive livestock-associated methicillin resistant Staphylococcus aureus (mecC MRSA/LA-MRSA) from dairy cattle in Malaysia. Microorganisms, 2020, 8(2): 147 CrossRef
  37. Reygaert W.C. An overview of the antimicrobial resistance mechanisms of bacteria. AIMS Microbiology, 2018, 4(3): 482-501 CrossRef
  38. Church D.L., Chow B.L., Lloyd T., Gregson D.B. Comparison of automated repetitive-sequence-based polymerase chain reaction and spa typing versus pulsed-field gel electrophoresis for molecular typing of methicillin-resistant Staphylococcus aureus. Diagnostic Microbiology and Infectious Disease, 2011, 69(1): 30-37 CrossRef
  39. Sheet O.H., Grabowski N.T., Klein G., Reich F., Abdulmawjood A. Characterisation of mecA gene negative Staphylococcus aureus isolated from bovine mastitis milk from Northern Germany. Folia Microbiologica, 2019, 64(6): 845-855 CrossRef
  40. Shrestha A., Bhattarai R.K., Luitel H., Karki S., Basnet H.B. Prevalence of methicillin-resistant Staphylococcus aureus and pattern of antimicrobial resistance in mastitis milk of cattle in Chitwan, Nepal. BMC Veterinary Research, 2021, 17(1): 239 CrossRef
  41. Mbindyo C.M., Gitao G.C., Plummer P.J., Kulohoma B.W., Mulei C.M., Bett R. Antimicrobial resistance profiles and genes of Staphylococci isolated from mastitic cow's milk in Kenya. Antibiotics, 2021, 10(7): 772 CrossRef
  42. Ndahetuye J.B., Leijon M., Bage R., Artursson K., Persson Y. Genetic characterization of Staphylococcus aureus from subclinical mastitis cases in dairy cows in Rwanda. Frontiers in Veterinary Science, 2021, 8: 751229 CrossRef
  43. Ingti B., Paul D., Maurya A.P., Bora D., Chanda D.D., Chakravarty A., Bhattacharjee A. Occurrence of bla (DHA-1) mediated cephalosporin resistance in Escherichia coli and their transcriptional response against cephalosporin stress: a report from India. Annals of Clinical Microbiology and Antimicrobials, 2017, 16(1): 13 CrossRef
  44. Moussa J., Panossian B., Nassour E., Salloum T., Abboud E., Tokajian S. Detailed characterization of an IncFII plasmid carrying blaOXA-48 from Lebanon. The Journal of Antimicrobial Chemotherapy, 2020, 75(9): 2462-2465 CrossRef
  45. Braun S.D., Ahmed M.F., El-Adawy H., Hotzel H., Engelmann I., Weiss D., Monecke S., Ehricht R. Surveillance of extended-spectrum beta-lactamase-producing Escherichia coli in dairy cattle farms in the Nile delta, Egypt. Frontiers in Microbiology, 2016, 7: 1020 CrossRef
  46. Jarraud S., Mougel C., Thioulouse J., Lina G., Meugnier H., Forey F., Nesme X., Etienne J., Vandenesch F. Relationships between Staphylococcus aureus genetic background, virulence factors, agr groups (alleles), and human disease. Infection and Immunity, 2002, 70(2): 631-641 CrossRef
  47. Vasquez M.T., Lubkin A., Reyes-Robles T., Day C.J., Lacey K.A., Jennings M.P., Torres V.J. Identification of a domain critical for Staphylococcus aureus LukED receptor targeting and lysis of erythrocytes. The Journal of Biological Chemistry, 2020, 295(50): 17241-17250 CrossRef
  48. Spaan A.N., van Strijp J.A.G., Torres V.J. Leukocidins: staphylococcal bi-component pore-forming toxins find their receptors. Nature Reviews Microbiology, 2017, 15(7): 435-447 CrossRef
  49. Terekhov V.I., Tishchenko A.S., Stepanenko A.V. Veterinariya Kubani, 2020, (5): 3-7 CrossRef (in Russ.).
  50. Murai M., Moriyama H., Hata E., Takeuchi F., Amemura-Maekawa J. Variation and association of fibronectin-binding protein genes fnbA and fnbB in Staphylococcus aureus Japanese isolates. Microbiology and Immunology, 2016, 60(5): 312-325 CrossRef
  51. Arciola C.R., Campoccia D., Gamberini S., Baldassarri L., Montanaro L. Prevalence of cna, fnbA and fnbB adhesin genes among Staphylococcus aureus isolates from orthopedic infections associated to different types of implant. FEMS Microbiology Letters, 2005, 246(1): 81-86 CrossRef
  52. Schröder A., Schröder B., Roppenser B., Linder S., Sinha B., Fässler R., Aepfelbacher M. Staphylococcus aureus fibronectin binding protein-A induces motile attachment sites and complex actin remodeling in living endothelial cells. Molecular Biology of the Cell, 2006, 17(12): 5198-5210 CrossRef
  53. Paharik A.E., Horswill A.R. The staphylococcal biofilm: adhesins, regulation, and host response. Microbiology Spectrum, 2016, 4(2) CrossRef
  54. Jung H.-R., Lee Y.J. Characterization of virulence factors in enterotoxin-producing Staphylococcus aureus from bulk tank milk. Animals, 2022, 12(3): 301 CrossRef
  55. Spier A., Stavru F., Cossart P. Interaction between intracellular bacterial pathogens and host cell mitochondria. Microbiology Spectrum, 2019, 7(2) CrossRef
  56. Guerra S.T., Orsi H., Joaquim S.F., Guimaraes F.F., Lopes B.C., Dalanezi F.M., Leite D.S., Langoni H., Pantoja J.C.F., Rall V.L.M., Hernandes R.T., Lucheis S.B., Ribeiro M.G. Short communication: Investigation of extra-intestinal pathogenic Escherichia coli virulence genes, bacterial motility, and multidrug resistance pattern of strains isolated from dairy cows with different severity scores of clinical mastitis. Journal of Dairy Science, 2020, 103(4): 3606-3614 CrossRef
  57. Silva V.O., Espeschit I.F., Moreira M.A. Clonal relationship of Escherichia coli biofilm producer isolates obtained from mastitic milk. Canadian Journal of Microbiology, 2013, 59(5): 291-293 CrossRef
  58. Zhou G., Mo W.J., Sebbel P., Min G., Neubert T.A., Glockshuber R., Wu X.R., Sun T.T., Kong X.P. Uroplakin Ia is the urothelial receptor for uropathogenic Escherichia coli: evidence from in vitro FimH binding. Journal of Cell Science, 2001, 114(22): 4095-4103 CrossRef
  59. Khalifeh O.M., Obaidat M.M. Urinary tract virulence genes in extended-spectrum beta-lactamase E. coli from dairy cows, beef cattle, and small ruminants. Acta Tropica, 2022, 234: 106611 CrossRef
  60. Donohue-Rolfe A., Acheson D.W.K., Keusch G.T. Shiga toxin: purification, structure, and function. Reviews of Infectious Diseases, 1991, 13(Supplement_4): S293-S297 CrossRef
  61. Jinnerot T., Tomaselli A.T.P., Johannessen G.S., Soderlund R., Urdahl A.M., Aspan A., Sekse C. The prevalence and genomic context of Shiga toxin 2a genes in E. coli found in cattle. PloS One, 2020, 15(8): e0232305 CrossRef
  62. Keykhaei N., Salari S., Rashki A. Frequency of k99, stx1, and stx2 virulence factors in Escherichia coli isolated from diarrheic and clinically healthy suckling calves in Sistan and Baluchistan Province, Iran. Archives of Razi Institute, 2021, 76(2): 283-291 CrossRef

 

back